fMRI Tutorials

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fMRI Tutorial

Folder: fMRI-Tutorial

19 items under this folder.

  • Jul 07, 2026

    5.3 Visualization and Statistical Thresholding with Nilearn

    • nilearn
    • visualization
    • thresholding
    • statistics
  • Jul 07, 2026

    1. MRI Basics

    • mri
    • Physics
  • Jul 07, 2026

    1.1 BOLD Signals and HRF

    • HRF
    • BOLD
  • Jul 07, 2026

    2.2 BIDS Structure

    • BIDS
    • mri
  • Jul 07, 2026

    2.3 fmriPrep with Docker

    • mri
    • fmriPrep
    • fMRI
  • Jul 07, 2026

    3.1 Experimental Design

    • design
    • task-fMRI
    • GLM
  • Jul 07, 2026

    3.2 General Linear Model

    • GLM
    • HRF
  • Jul 07, 2026

    4.2 High-level Analysis with FSL

    • GLM
    • FSL
  • Jul 07, 2026

    5.1 NiLearn fMRI Basic Analysis

    • fMRI
    • GLM
    • NiLearn
    • Python
  • Jul 07, 2026

    5.2 Confound Selection

    • fMRI
    • preprocessing
    • GLM
  • Jul 07, 2026

    6. Functional Connectivity and Resting State

    • fMRI
    • connectivity
    • rest
    • nilearn
  • Jul 07, 2026

    7. Task-fMRI Connectivity (PPI and RSA)

    • fMRI
    • connectivity
    • PPI
    • RSA
    • task
  • Jul 03, 2026

    Session 1 Slides — Preprocessing

    • Jul 03, 2026

      Session 2 Slides — GLM Analysis

      • Jun 19, 2026

        2.1 MRI Data Acquisition and Format

        • DICOM
        • MRI
        • BIDS
        • heudiconv
        • dcm2bids
      • Jun 19, 2026

        Software Versions

        • reference
        • reproducibility
      • May 15, 2026

        2.4 Quality Control with MRIQC

        • mri
        • MRIQC
      • May 15, 2026

        2.5 fMRIPrep and FitLins

        • fMRIPrep
        • FitLins
      • May 15, 2026

        4.1 First-level Analysis with FSL

        • GLM
        • FSL

      Created with Quartz v4.5.2 © 2026

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      • MSense